文献类型：期刊文献

英文题名：A re-evaluation of the Chaetothyriales using criteria of comparative biology

作者：Quan, Yu Muggia, Lucia Moreno, Leandro F. Wang, Meizhu Al-Hatmi, Abdullah M. S. Menezes, Nickolas da Silva Shi, Dongmei Deng, Shuwen Ahmed, Sarah Hyde, Kevin D. Vicente, Vania A. Kang, Yingqian Stielow, J. Benjamin de Hoog, Sybren

第一作者：Quan, Yu

通信作者：de Hoog, S[1];Kang, YQ[2];Kang, YQ[3];de Hoog, S[4];de Hoog, S[5];Shi, DM[6];Shi, DM[7];de Hoog, S[8];Kang, YQ[9]

机构：[1]Radboud Univ Nijmegen, Ctr Expertise Mycol, Med Ctr, Canisius Wilhelmina Hosp, Nijmegen, Netherlands;[2]Guizhou Med Univ, Sch Basic Med Sci, Key Lab Environm Pollut Monitoring & Dis Control, Minist Educ Guizhou, Guiyang, Peoples R China;[3]Guizhou Med Univ, Sch Basic Med Sci, Key Lab Med Microbiol & Parasitol, Guiyang, Peoples R China;[4]Guizhou Inst Technol, Coll Food & Pharmaceut Engn, Guiyang, Peoples R China;[5]Univ Trieste, Dept Life Sci, Trieste, Italy;[6]Amsterdam Med Ctr, Amsterdam, Netherlands;[7]Fdn Atlas Clin Fungi, Hilversum, Netherlands;[8]Minist Hlth, Directorate Gen Hlth Serv, Ibri, Oman;[9]Univ Fed Parana, Postgrad Program Microbiol Parasitol & Pathol Bio, Dept Basic Pathol, Curitiba, Parana, Brazil;[10]Jining 1 Peoples Hosp, Dept Dermatol, Jining, Shandong, Peoples R China;[11]Jining 1 Peoples Hosp, Lab Med Mycol, Jining, Shandong, Peoples R China;[12]Peoples Hosp Suzhou Natl New & Hitech Ind Dev Zon, Dept Med Microbiol, Suzhou, Peoples R China;[13]Mae Fah Luang Univ, Ctr Excellence Fungal Divers, Chiang Rai, Thailand;[14]Thermo Fisher Diagnost, Specialty Diagnost Grp, Landsmeer, Netherlands;[15]Guizhou Acad Tobacco Sci, Guiyang, Peoples R China;[16]Univ Fed Parana, Dept Bioproc Engn & Biotechnol, Engn Bioproc & Biotechnol Postgrad Program, Curitiba, Parana, Brazil

第一机构：Radboud Univ Nijmegen, Ctr Expertise Mycol, Med Ctr, Canisius Wilhelmina Hosp, Nijmegen, Netherlands

通信机构：corresponding author), Radboud Univ Nijmegen, Ctr Expertise Mycol, Med Ctr, Canisius Wilhelmina Hosp, Nijmegen, Netherlands;corresponding author), Guizhou Med Univ, Sch Basic Med Sci, Key Lab Environm Pollut Monitoring & Dis Control, Minist Educ Guizhou, Guiyang, Peoples R China;corresponding author), Guizhou Med Univ, Sch Basic Med Sci, Key Lab Med Microbiol & Parasitol, Guiyang, Peoples R China;corresponding author), Fdn Atlas Clin Fungi, Hilversum, Netherlands;corresponding author), Univ Fed Parana, Postgrad Program Microbiol Parasitol & Pathol Bio, Dept Basic Pathol, Curitiba, Parana, Brazil;corresponding author), Jining 1 Peoples Hosp, Dept Dermatol, Jining, Shandong, Peoples R China;corresponding author), Jining 1 Peoples Hosp, Lab Med Mycol, Jining, Shandong, Peoples R China;corresponding author), Peoples Hosp Suzhou Natl New & Hitech Ind Dev Zon, Dept Med Microbiol, Suzhou, Peoples R China;corresponding author), Guizhou Acad Tobacco Sci, Guiyang, Peoples R China.

年份：2020

卷号：103

期号：1

起止页码：47-85

外文期刊名：FUNGAL DIVERSITY

收录：;Scopus(收录号：2-s2.0-85089019238);WOS:【SCI-EXPANDED(收录号:WOS:000555756000001)】；

基金：We would like to thank China Scholarship Council for financial support for Y.Q. (Number 201708520100). Hein van der Lee and Marlou Tehupeiory-Kooreman are acknowledged for technical assistance. Qing Tian is thanked for double checking the ordinal level tree of the Chaetothyriales.

语种：英文

外文关键词：Black yeasts; Phylogeny; Ecology; Ancestral reconstruction; Evolution; Nomenclature

摘要：Chaetothyriales is an ascomycetous order within Eurotiomycetes. The order is particularly known through the black yeasts and filamentous relatives that cause opportunistic infections in humans. All species in the order are consistently melanized. Ecology and habitats of species are highly diverse, and often rather extreme in terms of exposition and toxicity. Families are defined on the basis of evolutionary history, which is reconstructed by time of divergence and concepts of comparative biology using stochastical character mapping and a multi-rate Brownian motion model to reconstruct ecological ancestral character states. Ancestry is hypothesized to be with a rock-inhabiting life style. Ecological disparity increased significantly in late Jurassic, probably due to expansion of cytochromes followed by colonization of vacant ecospaces. Dramatic diversification took place subsequently, but at a low level of innovation resulting in strong niche conservatism for extant taxa. Families are ecologically different in degrees of specialization. One of the clades has adapted ant domatia, which are rich in hydrocarbons. In derived families, similar processes have enabled survival in domesticated environments rich in creosote and toxic hydrocarbons, and this ability might also explain the pronounced infectious ability of vertebrate hosts observed in these families. Conventional systems of morphological classification poorly correspond with recent phylogenetic data. Species are hypothesized to have low competitive ability against neighboring microbes, which interferes with their laboratory isolation on routine media. The dataset is unbalanced in that a large part of the extant biodiversity has not been analyzed by molecular methods, novel taxonomic entities being introduced at a regular pace. Our study comprises all available species sequenced to date for LSU and ITS, and a nomenclatural overview is provided. A limited number of species could not be assigned to any extant family.